I've put this in the 16mm section as I have no experience of emulsion scratches in Super 8,
I have noticed that the problem seems to affect colour films more than B&W. The bulk of my 16mm features are B&W, but only one has an emulsion scratch, which is quite brief, whereas most of the colour prints I have, have this problem.
The other thing I have noticed, not just in my print, but the pictures Tom posted. Although these films are coming from different sources, and even different countries, I have noticed that the emulsion scratch always appears in the same place, about 2/3rds or 3/4ths to the right. I'm wondering where exactly the problem occurs on all these different machines?